Blog Posts

bam.iobio 2.0
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bam.iobio 2.0

Help page, local CRAM support, and improved coverage chart

BY Anders Pitman ON May 1, 2019

Genepanel.iobio Released
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Genepanel.iobio Released

Generate list of genes based on suspected conditions & phenotypes

BY Aditya Ekawade ON Nov 19, 2018

gene.iobio 3.0
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gene.iobio 3.0

New look and new functionality!

BY Tony DiSera ON Jul 20, 2018

ClinVar variants, gnomAD, affected status
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ClinVar variants, gnomAD, affected status

What's new in gene.iobio 2.5.0

BY Tony DiSera ON Sep 29, 2017

Loading data into gene.iobio
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Loading data into gene.iobio

Loading your variant and alignment files

BY Tony DiSera ON Sep 27, 2017

Coverage analysis
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Coverage analysis

Identifying problems with coverage

BY Alistair Ward ON Jul 11, 2017

Gene.iobio 2.3.0
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Gene.iobio 2.3.0

Output data from gene.iobio

BY Alistair Ward ON Apr 26, 2017

Gene.iobio 2.2.0
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Gene.iobio 2.2.0

Major update to gene.iobio

BY Alistair Ward ON Feb 27, 2017

Reference genomes
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Reference genomes

Using alternate references

BY Alistair Ward ON Jan 23, 2017

Viewing ClinVar variants
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Viewing ClinVar variants

What pathogenic variants do we know?

BY Alistair Ward ON Nov 3, 2016

IOBIO Now in Galaxy
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IOBIO Now in Galaxy

bam.iobio and vcf.iobio have been integrated into galaxy

BY Chase Miller ON Nov 2, 2016

Gene.iobio version 2.1
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Gene.iobio version 2.1

A new version of gene.iobio is now available

BY Alistair Ward ON Sep 22, 2016

bam.iobio facelift
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bam.iobio facelift

Query the origin of sequencing data

BY Alistair Ward ON Sep 20, 2016

Using bookmarks
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Using bookmarks

What are bookmarks and why should I use them?

BY Alistair Ward ON Aug 3, 2016

iobio is hiring
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iobio is hiring

Web dev position available

BY Alistair Ward ON Jun 29, 2016

Why Am I Sick? With This Tool, Doctors Could Know At a Glance
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Why Am I Sick? With This Tool, Doctors Could Know At a Glance

A radio interview with Gabor Marth about taxonomer.iobio

BY Gabor Marth ON Jun 15, 2016

Gene.iobio museum exhibit
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Gene.iobio museum exhibit

Gene.iobio is featured in Genome - Unlocking Life's Code museum exhibition

BY Tony DiSera ON May 31, 2016

Taxonomer.iobio
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Taxonomer.iobio

Metagenomic Classification Tool

BY Chase Miller ON May 26, 2016

Phenolyzer
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Phenolyzer

How do I generate phenotype driven gene lists?

BY Alistair Ward ON Mar 30, 2016

ACMG 56 genes
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ACMG 56 genes

Analyzing genes identified by the ACMG

BY Alistair Ward ON Mar 29, 2016

Multi gene analysis
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Multi gene analysis

How do I analyze lists of genes, rather than a single gene?

BY Alistair Ward ON Mar 28, 2016

GENCODE or RefSeq?
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GENCODE or RefSeq?

Which gene set and transcript should I use?

BY Alistair Ward ON Mar 21, 2016

What is the filter status in gene.iobio?
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What is the filter status in gene.iobio?

Only display desired variants

BY Alistair Ward ON Mar 16, 2016

Gene.iobio version 2.0
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Gene.iobio version 2.0

Release of version 2.0 of gene.iobio with major new functionality

BY Alistair Ward ON Mar 14, 2016

ICGC Data Portal
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ICGC Data Portal

The ICGC data portal team integrated bam.iobio into their awesome data portal

BY Chase Miller ON Dec 8, 2015

IOBIO Page views
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IOBIO Page views

Looking at user growth over the last 6 months

BY Chase Miller ON Sep 29, 2015

Latest Exome sequencing in gene.iobio
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Latest Exome sequencing in gene.iobio

Analyzing a trio with iobio

BY Alistair Ward ON Sep 29, 2015

Latest Gene.iobio features
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Latest Gene.iobio features

Multi-sample vcf, https support, and allele counts

BY Tony DiSera ON Sep 27, 2015

Gene.iobio integrates VEP
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Gene.iobio integrates VEP

Polyphen & SIFT classifications, Regulatory annotations, and HGVS & dbSNP ids.

BY Tony DiSera ON Sep 7, 2015

Creating a compressed and indexed VCF
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Creating a compressed and indexed VCF

The .vcf.gz and .vcf.gz.tbi file pair

BY Yi Qiao ON Sep 3, 2015

New app gene.iobio
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New app gene.iobio

interrogate potential disease-causing variants

BY Chase Miller ON Aug 4, 2015

Install Locally Via Docker
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Install Locally Via Docker

We have released several docker containers to simplify the local install process

BY Yi Qiao ON Jul 5, 2015

Pacbio Alignments In Bam.iobio
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Pacbio Alignments In Bam.iobio

Schatz Lab posts some pacbio data

BY Chase Miller ON Apr 15, 2015

Vcf.iobio Released
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Vcf.iobio Released

Second iobio app released

BY Tony DiSera ON Nov 25, 2014

Univeristy of Utah Blog Post on Bam.iobio
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Univeristy of Utah Blog Post on Bam.iobio

First iobio app published in Nature Methods

BY Alistair Ward ON Nov 25, 2014

Scope Radio Interview
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Scope Radio Interview

First iobio app published in Nature Methods

BY Gabor Marth ON Nov 25, 2014

Bam.iobio published
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Bam.iobio published

First iobio app published in Nature Methods

BY Chase Miller ON Nov 25, 2014

Your next discovery awaits

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